STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG33342.1ABC-type antimicrobial peptide transport system, permease component. (822 aa)    
Predicted Functional Partners:
SDG33703.1
ABC-type lipoprotein export system, ATPase component.
 
   0.851
SDG33004.1
Putative ABC transport system ATP-binding protein.
 
   0.846
SDG32976.1
HlyD family secretion protein.
 
   0.838
SDG32910.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.768
SDG33313.1
FtsX-like permease family protein.
 
   
0.654
SDG33371.1
MacB-like core domain-containing protein.
 
   
0.638
SDI54347.1
Putative ABC transport system ATP-binding protein.
 
   0.596
SDG33734.1
Outer membrane protein.
 
   0.580
SDG32947.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
  
     0.515
SDH67496.1
Putative ABC transport system ATP-binding protein.
 
   0.505
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.