STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG29804.1Glycosyl hydrolases family 2, TIM barrel domain. (439 aa)    
Predicted Functional Partners:
SDG29767.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
     0.951
SDG29733.1
Beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
 
     0.932
SDH19853.1
Hypothetical protein.
  
     0.642
SDH05994.1
Hypothetical protein.
  
     0.618
SDG29701.1
Mn-containing catalase.
       0.503
SDI44870.1
Uncharacterized conserved protein YciI, contains a putative active-site phosphohistidine.
  
     0.419
SDG29672.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
    0.406
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.