STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG29359.1Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (469 aa)    
Predicted Functional Partners:
SDG29436.1
Lysophospholipase L1.
   0.949
SDG29472.1
Lysophospholipase L1.
   0.940
SDH54998.1
Lysophospholipase L1.
   0.872
SDG29397.1
Glycosyl hydrolases family 2; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.859
SDG29547.1
Hypothetical protein.
 
     0.839
SDI73955.1
Lysophospholipase L1.
   0.809
SDG29574.1
Rhamnogalacturonyl hydrolase YesR.
 
    0.801
SDH55084.1
Unsaturated rhamnogalacturonyl hydrolase.
     0.780
SDH92443.1
Pectinesterase.
 
   
 0.769
SDG29506.1
Glycosyl hydrolases family 43.
 
     0.712
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.