STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG38465.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
SDG38423.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
 
   
 0.953
SDG38502.1
3-dehydroquinate synthase.
 
   
 0.951
SDG38587.1
Hypothetical protein.
 
  
 0.939
SDG38550.1
4-hydroxybenzoate polyprenyltransferase.
 
   
 0.937
SDG38626.1
Hypothetical protein.
 
   
 0.928
SDG86342.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
   
 0.749
SDH61824.1
Cytochrome c.
 
   
 0.728
SDG38663.1
Transmembrane family 220, helix.
 
     0.719
SDH08350.1
Hypothetical protein.
 
     0.566
SDG34286.1
Cytochrome c/hypothetical protein.
 
  
 0.466
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.