STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG38663.1Transmembrane family 220, helix. (120 aa)    
Predicted Functional Partners:
SDG38626.1
Hypothetical protein.
 
     0.800
SDG38550.1
4-hydroxybenzoate polyprenyltransferase.
 
     0.792
SDG38587.1
Hypothetical protein.
       0.760
SDG38465.1
Hypothetical protein.
 
     0.719
SDG38502.1
3-dehydroquinate synthase.
       0.707
SDG38423.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
       0.666
SDG09340.1
Polysaccharide deacetylase.
  
     0.655
SDF72585.1
Repeat domain-containing protein.
  
     0.642
SDH94204.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
  
     0.591
SDG66210.1
AsmA-like C-terminal region.
  
     0.533
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.