STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG38778.1Gluconate kinase, FGGY family; Belongs to the FGGY kinase family. (508 aa)    
Predicted Functional Partners:
SDG38817.1
AraC-type DNA-binding protein.
 
     0.802
SDG39035.1
Gluconate permease GntP.
 
  
 0.582
SDI29572.1
Gnt-I system high-affinity gluconate transporter.
 
  
 0.500
SDG38855.1
Regulator of RNase E activity RraA.
 
     0.490
SDG38891.1
Galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.487
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.467
SDG75032.1
L-rhamnose mutarotase.
  
  
 0.467
SDH39243.1
L-rhamnose mutarotase.
  
  
 0.467
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.459
SDG38929.1
Bile acid:Na+ symporter, BASS family.
 
     0.433
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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