STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG30282.1Nucleotide-binding universal stress protein, UspA family. (271 aa)    
Predicted Functional Partners:
SDH41623.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24 family.
  
     0.577
SDH76450.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.511
SDH76671.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.454
SDF71710.1
Protein of unknown function.
  
     0.442
SDG41985.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.428
SDI60394.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.421
SDG67903.1
Hypothetical protein.
  
     0.417
SDI75116.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.408
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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