STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG29547.1Hypothetical protein. (713 aa)    
Predicted Functional Partners:
SDG29472.1
Lysophospholipase L1.
 
     0.902
SDG29436.1
Lysophospholipase L1.
 
     0.887
SDG29359.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
     0.839
SDG29506.1
Glycosyl hydrolases family 43.
 
   
 0.799
SDG29574.1
Rhamnogalacturonyl hydrolase YesR.
 
     0.795
SDG29397.1
Glycosyl hydrolases family 2; Belongs to the glycosyl hydrolase 2 family.
 
     0.727
SDI73955.1
Lysophospholipase L1.
 
     0.699
SDI74030.1
alpha-L-rhamnosidase.
 
     0.670
SDG29601.1
Alpha-glucosidase, glycosyl hydrolase family GH31; Belongs to the glycosyl hydrolase 31 family.
       0.637
SDG20217.1
BNR repeat-containing family member.
  
     0.626
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.