STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG63396.1Ribose-phosphate pyrophosphokinase. (340 aa)    
Predicted Functional Partners:
SDG86943.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.952
SDH12850.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 0.952
Tkt
Transketolase; Belongs to the transketolase family.
   
 
 0.940
SDF63348.1
Ribose-phosphate pyrophosphokinase.
  
  
 
0.925
SDH94924.1
Amidophosphoribosyltransferase.
  
 0.925
SDF90549.1
Phosphoglucomutase.
  
 0.923
RpiB
Ribose 5-phosphate isomerase B.
    
 0.920
RpiA
Ribose-5-phosphate isomerase.
  
 
 0.915
rpiA
Ribose-5-phosphate isomerase.
  
 
 0.915
rplY
Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
  
  
 0.914
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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