STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG65742.1Rod shape-determining protein MreD. (155 aa)    
Predicted Functional Partners:
rodA
Rod shape determining protein RodA; Belongs to the SEDS family.
  
    0.845
MrdA
Penicillin-binding protein 2.
       0.841
MreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
    0.788
SDI67848.1
Family of unknown function.
 
     0.724
SDI20620.1
Cell division protein FtsQ.
  
     0.691
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.682
SDI78801.1
Protein of unknown function.
  
     0.673
SDH86281.1
Hypothetical protein.
  
     0.663
SDG73159.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
     0.660
GldM
Gliding motility-associated protein GldM.
  
     0.648
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.