STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG58725.1Starch-binding associating with outer membrane. (568 aa)    
Predicted Functional Partners:
SDG58759.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.949
SDG58860.1
Signal transduction histidine kinase.
 
   
 0.832
SDG58685.1
Fructan beta-fructosidase; Belongs to the glycosyl hydrolase 32 family.
 
     0.825
SDG58793.1
Fructokinase.
 
     0.796
SDG58828.1
MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
     0.781
SDG05944.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.645
SDH93921.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.633
SDH03154.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.622
SDH88310.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.601
SDI74068.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.600
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.