STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG59860.1ABC-type antimicrobial peptide transport system, permease component. (797 aa)    
Predicted Functional Partners:
SDG33004.1
Putative ABC transport system ATP-binding protein.
 
 
 0.978
SDG33703.1
ABC-type lipoprotein export system, ATPase component.
 
 
 0.977
SDI54347.1
Putative ABC transport system ATP-binding protein.
 
 
 0.944
SDH67496.1
Putative ABC transport system ATP-binding protein.
 
 
 0.931
SDF89990.1
Putative ABC transport system ATP-binding protein.
 
 
 0.928
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.919
lolD-2
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.919
SDG32976.1
HlyD family secretion protein.
 
 
 0.856
SDG32910.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.766
SDG59825.1
FtsX-like permease family protein.
 
   
0.579
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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