STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG90420.1Protein of unknown function. (155 aa)    
Predicted Functional Partners:
SDG71043.1
pRiA4b ORF-3-like protein.
  
     0.686
SDI49766.1
YbbR-like protein.
 
    0.678
SDH85498.1
Putative porin.
 
     0.648
SDI51224.1
Protein of unknown function.
  
     0.637
SDI47345.1
Hypothetical protein.
  
     0.635
SDI47016.1
Outer membrane protein assembly factor BamA.
  
     0.618
SDI34712.1
Protein of unknown function.
  
     0.583
GldM
Gliding motility-associated protein GldM.
  
     0.579
SDI47425.1
Hypothetical protein.
  
     0.575
SDG90456.1
ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family.
       0.571
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.