Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF82034.1 | SDF86342.1 | SAMN05192573_101467 | SAMN05192573_101578 | 2'-5' RNA ligase. | Hypothetical protein. | 0.596 |
SDF82034.1 | SDF87668.1 | SAMN05192573_101467 | SAMN05192573_101617 | 2'-5' RNA ligase. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.709 |
SDF82034.1 | SDG05309.1 | SAMN05192573_101467 | SAMN05192573_102115 | 2'-5' RNA ligase. | MAC/Perforin domain-containing protein. | 0.775 |
SDF82034.1 | SDG39583.1 | SAMN05192573_101467 | SAMN05192573_103289 | 2'-5' RNA ligase. | Hypothetical protein. | 0.618 |
SDF82034.1 | SDG43200.1 | SAMN05192573_101467 | SAMN05192573_103391 | 2'-5' RNA ligase. | Hypothetical protein. | 0.677 |
SDF82034.1 | SDH08617.1 | SAMN05192573_101467 | SAMN05192573_106263 | 2'-5' RNA ligase. | Alginate lyase. | 0.720 |
SDF82034.1 | SDH38499.1 | SAMN05192573_101467 | SAMN05192573_10997 | 2'-5' RNA ligase. | Hypothetical protein. | 0.594 |
SDF82034.1 | SDH61459.1 | SAMN05192573_101467 | SAMN05192573_11135 | 2'-5' RNA ligase. | Protein of unknown function. | 0.520 |
SDF86342.1 | SDF82034.1 | SAMN05192573_101578 | SAMN05192573_101467 | Hypothetical protein. | 2'-5' RNA ligase. | 0.596 |
SDF86342.1 | SDF87668.1 | SAMN05192573_101578 | SAMN05192573_101617 | Hypothetical protein. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.500 |
SDF86342.1 | SDG05309.1 | SAMN05192573_101578 | SAMN05192573_102115 | Hypothetical protein. | MAC/Perforin domain-containing protein. | 0.689 |
SDF86342.1 | SDG39583.1 | SAMN05192573_101578 | SAMN05192573_103289 | Hypothetical protein. | Hypothetical protein. | 0.646 |
SDF86342.1 | SDH08617.1 | SAMN05192573_101578 | SAMN05192573_106263 | Hypothetical protein. | Alginate lyase. | 0.747 |
SDF86342.1 | SDH38499.1 | SAMN05192573_101578 | SAMN05192573_10997 | Hypothetical protein. | Hypothetical protein. | 0.769 |
SDF86342.1 | SDH61459.1 | SAMN05192573_101578 | SAMN05192573_11135 | Hypothetical protein. | Protein of unknown function. | 0.494 |
SDF86342.1 | SDH88415.1 | SAMN05192573_101578 | SAMN05192573_113140 | Hypothetical protein. | Putative Ig domain-containing protein. | 0.452 |
SDF87668.1 | SDF82034.1 | SAMN05192573_101617 | SAMN05192573_101467 | Type I phosphodiesterase / nucleotide pyrophosphatase. | 2'-5' RNA ligase. | 0.709 |
SDF87668.1 | SDF86342.1 | SAMN05192573_101617 | SAMN05192573_101578 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Hypothetical protein. | 0.500 |
SDF87668.1 | SDG05309.1 | SAMN05192573_101617 | SAMN05192573_102115 | Type I phosphodiesterase / nucleotide pyrophosphatase. | MAC/Perforin domain-containing protein. | 0.741 |
SDF87668.1 | SDG39583.1 | SAMN05192573_101617 | SAMN05192573_103289 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Hypothetical protein. | 0.574 |
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