Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG43271.1 | SDH21499.1 | SAMN05192573_103393 | SAMN05192573_107229 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Acetyl esterase/lipase. | 0.487 |
SDG43271.1 | SDH79440.1 | SAMN05192573_103393 | SAMN05192573_112215 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Peptide-methionine (R)-S-oxide reductase/peptide methionine sulfoxide reductase msrA/msrB. | 0.497 |
SDG43271.1 | nadE | SAMN05192573_103393 | SAMN05192573_112170 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.726 |
SDG43271.1 | ribBA | SAMN05192573_103393 | SAMN05192573_12737 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.999 |
SDH14169.1 | SDH21499.1 | SAMN05192573_10750 | SAMN05192573_107229 | Glycine/D-amino acid oxidase. | Acetyl esterase/lipase. | 0.430 |
SDH14169.1 | SDI21933.1 | SAMN05192573_10750 | SAMN05192573_11797 | Glycine/D-amino acid oxidase. | Hypothetical protein. | 0.726 |
SDH14169.1 | SDI61946.1 | SAMN05192573_10750 | SAMN05192573_12548 | Glycine/D-amino acid oxidase. | Hypothetical protein. | 0.726 |
SDH14169.1 | acpP | SAMN05192573_10750 | SAMN05192573_115138 | Glycine/D-amino acid oxidase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.726 |
SDH21499.1 | SDG43271.1 | SAMN05192573_107229 | SAMN05192573_103393 | Acetyl esterase/lipase. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.487 |
SDH21499.1 | SDH14169.1 | SAMN05192573_107229 | SAMN05192573_10750 | Acetyl esterase/lipase. | Glycine/D-amino acid oxidase. | 0.430 |
SDH21499.1 | SDH79440.1 | SAMN05192573_107229 | SAMN05192573_112215 | Acetyl esterase/lipase. | Peptide-methionine (R)-S-oxide reductase/peptide methionine sulfoxide reductase msrA/msrB. | 0.428 |
SDH21499.1 | SDI21933.1 | SAMN05192573_107229 | SAMN05192573_11797 | Acetyl esterase/lipase. | Hypothetical protein. | 0.470 |
SDH21499.1 | SDI61946.1 | SAMN05192573_107229 | SAMN05192573_12548 | Acetyl esterase/lipase. | Hypothetical protein. | 0.470 |
SDH21499.1 | acpP | SAMN05192573_107229 | SAMN05192573_115138 | Acetyl esterase/lipase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.470 |
SDH21499.1 | fusA | SAMN05192573_107229 | SAMN05192573_112206 | Acetyl esterase/lipase. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.647 |
SDH21499.1 | nadE | SAMN05192573_107229 | SAMN05192573_112170 | Acetyl esterase/lipase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.430 |
SDH21499.1 | ribBA | SAMN05192573_107229 | SAMN05192573_12737 | Acetyl esterase/lipase. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.463 |
SDH21499.1 | topA | SAMN05192573_107229 | SAMN05192573_103139 | Acetyl esterase/lipase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.430 |
SDH79440.1 | SDG43271.1 | SAMN05192573_112215 | SAMN05192573_103393 | Peptide-methionine (R)-S-oxide reductase/peptide methionine sulfoxide reductase msrA/msrB. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.497 |
SDH79440.1 | SDH21499.1 | SAMN05192573_112215 | SAMN05192573_107229 | Peptide-methionine (R)-S-oxide reductase/peptide methionine sulfoxide reductase msrA/msrB. | Acetyl esterase/lipase. | 0.428 |
page 1 of 2