STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH29396.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
SDH29413.1
PRTRC system protein E.
 
     0.809
SDH29379.1
Hypothetical protein.
       0.773
SDH29429.1
PRTRC system protein C.
       0.719
SDH29358.1
Phage/plasmid-like protein TIGR03299.
       0.645
SDH29448.1
Hypothetical protein.
       0.557
SDH29463.1
PRTRC system protein B.
       0.557
SDH29482.1
PRTRC system ThiF family protein.
       0.557
SDH29499.1
Hypothetical protein.
       0.546
SDH29340.1
Single-strand DNA-binding protein.
       0.517
SDG08936.1
AraC-type DNA-binding protein.
  
     0.400
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.