STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH25566.1Gluconate 2-dehydrogenase subunit 3. (215 aa)    
Predicted Functional Partners:
SDH25524.1
Choline dehydrogenase.
 
     0.950
SDH25487.1
Protein of unknown function.
 
     0.677
SDF70413.1
Hydroxypyruvate isomerase.
  
     0.649
SDH63479.1
NIPSNAP protein.
  
     0.585
SDI54465.1
NIPSNAP protein.
  
     0.548
SDI54981.1
Choline dehydrogenase.
 
     0.541
SDI21360.1
Choline dehydrogenase.
 
     0.537
SDI66449.1
Choline dehydrogenase.
 
     0.536
SDG48806.1
Protein of unknown function.
 
     0.512
SDI55030.1
Gluconate 2-dehydrogenase subunit 3.
  
     0.499
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.