STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH27758.1CarboxypepD_reg-like domain-containing protein. (455 aa)    
Predicted Functional Partners:
SDI58536.1
Iron complex outermembrane recepter protein.
 
 
 0.837
SDH27787.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
    0.820
SDF64332.1
CarboxypepD_reg-like domain-containing protein.
 
 
 
 0.792
SDF87519.1
TonB-linked outer membrane protein, SusC/RagA family.
  
   0.763
SDH19300.1
TonB-linked outer membrane protein, SusC/RagA family.
  
   0.733
SDF87377.1
TonB-linked outer membrane protein, SusC/RagA family.
  
   0.697
SDG29929.1
TonB-linked outer membrane protein, SusC/RagA family.
  
   0.656
SDH93114.1
Long-chain fatty acid transport protein.
  
     0.632
SDI55292.1
Outer membrane receptor proteins, mostly Fe transport.
  
   0.626
SDH54186.1
Hypothetical protein.
  
     0.623
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.