STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH28206.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
SDH28235.1
Predicted DNA-binding protein, MmcQ/YjbR family.
       0.801
SDH28260.1
Regulator of ribonuclease activity B.
       0.727
PepT
Peptidase T. Metallo peptidase. MEROPS family M20B; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.607
SDH28283.1
Zinc carboxypeptidase.
       0.606
SDH28309.1
Rhomboid family protein.
       0.606
SDH28156.1
N-acetylglutamate synthase, GNAT family.
       0.472
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.