STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH42937.1Putative NADH-flavin reductase. (223 aa)    
Predicted Functional Partners:
SDH42898.1
Hypothetical protein.
       0.762
SDH42859.1
DNA-binding transcriptional regulator, MarR family.
 
     0.555
SDG10407.1
Putative ATP-dependent endonuclease of the OLD family.
   
    0.489
SDH18119.1
Zn-finger domain of CDGSH type-containing protein.
   
    0.424
SDH65077.1
Putative signal transducing protein.
  
  
 0.417
SDF73186.1
Hypothetical protein.
   
    0.404
SDH67061.1
General stress protein 26.
  
    0.404
SDI83644.1
Hypothetical protein.
   
    0.404
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.