STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH53539.1Protein of unknown function. (355 aa)    
Predicted Functional Partners:
SDH53579.1
Hypothetical protein.
 
     0.947
SDH53497.1
Bacteroides conjugative transposon TraK protein.
 
   
 0.871
SDH53413.1
Hypothetical protein.
 
     0.870
SDH53335.1
Hypothetical protein.
 
     0.869
SDH53373.1
Hypothetical protein.
 
     0.869
SDH53456.1
Bacteroides conjugative transposon TraJ protein.
 
     0.869
SDH53211.1
Protein of unknown function.
 
     0.845
SDH53251.1
Bacteroides conjugation system ATPase, TraG family.
 
   
 0.844
SDH53163.1
Protein of unknown function.
 
     0.842
SDH29903.1
Protein of unknown function.
 
   
 0.789
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.