STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH48676.1Bacteroides conjugative transposon TraJ protein. (399 aa)    
Predicted Functional Partners:
SDH48620.1
Bacteroides conjugative transposon TraK protein.
 
   
 0.950
SDH48524.1
Bacteroides conjugative transposon TraM protein.
 
     0.948
SDH48910.1
Bacteroides conjugation system ATPase, TraG family.
 
   
 0.948
SDH48728.1
Hypothetical protein.
 
   
 0.947
SDH48818.1
Hypothetical protein.
 
     0.947
SDH48946.1
Protein of unknown function.
 
     0.947
SDH48773.1
Hypothetical protein.
 
     0.946
SDH48479.1
Hypothetical protein.
 
     0.943
SDH48997.1
Protein of unknown function.
 
     0.912
SDH29903.1
Protein of unknown function.
 
   
 0.792
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.