STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH75625.1NADPH:quinone reductase. (322 aa)    
Predicted Functional Partners:
SDH75561.1
Dimethylhistidine N-methyltransferase.
       0.746
SDH75591.1
Hypothetical protein.
       0.746
SDH75655.1
Protein of unknown function.
       0.728
SDI27792.1
NADPH:quinone reductase.
  
     0.712
SDH75526.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   0.661
SDH75688.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
   0.605
SDH75716.1
Hypothetical protein.
       0.495
SDF84492.1
Zinc-binding dehydrogenase.
  
     0.485
SDH75746.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
    0.449
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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