STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH78132.1Stress responsive A/B Barrel Domain. (104 aa)    
Predicted Functional Partners:
SDI54735.1
Fucose permease.
  
     0.641
SDH78173.1
Hypothetical protein.
       0.639
SDH78209.1
Hypothetical protein.
       0.630
SDH78094.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
       0.558
SDH78016.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
       0.490
SDH78056.1
Hypothetical protein.
       0.490
SDH78246.1
Phosphotransferase enzyme family protein.
       0.451
SDH78280.1
DNA-binding transcriptional regulator, AcrR family.
       0.451
SDI00333.1
PAP2 superfamily protein.
  
     0.426
SDH87697.1
PAP2 superfamily protein.
  
     0.415
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.