STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH73523.1Tetratricopeptide repeat-containing protein. (608 aa)    
Predicted Functional Partners:
SDG46968.1
N-terminal double-transmembrane domain-containing protein.
 
   
 0.795
SDI42436.1
Hypothetical protein.
 
   
 0.783
SDG34813.1
Outer membrane protein OmpA.
 
  
 0.775
SDG65070.1
Hypothetical protein.
  
     0.774
SDH84863.1
Hypothetical protein.
 
     0.773
SDI64521.1
Protein of unknown function.
 
     0.771
SDH97376.1
Protein of unknown function DUF58.
 
  
 0.758
SDH73494.1
Protein of unknown function.
 
     0.743
SDI60999.1
Hypothetical protein.
  
     0.614
SDI61014.1
Hypothetical protein.
  
     0.605
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.