STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH74739.1HlyD family secretion protein. (433 aa)    
Predicted Functional Partners:
SDH74702.1
ATP-binding cassette, subfamily B.
 
 
 0.962
SDH74586.1
Thioredoxin.
 
   
 0.859
SDH74665.1
Thiol-disulfide isomerase or thioredoxin.
       0.606
SDI54387.1
Outer membrane protein TolC.
 
   0.513
SDG06250.1
Outer membrane protein TolC.
 
   0.509
SDI01945.1
Outer membrane protein TolC.
 
   0.509
SDF91522.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
  
 
 0.506
SDH33992.1
Outer membrane protein TolC.
 
   0.492
SDG99102.1
Outer membrane efflux protein.
 
   0.482
SDF77717.1
Outer membrane protein, cobalt-zinc-cadmium efflux system.
 
   0.475
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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