STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH88277.1Starch-binding associating with outer membrane. (631 aa)    
Predicted Functional Partners:
SDH88310.1
TonB-linked outer membrane protein, SusC/RagA family.
 
 
   0.958
SDH88243.1
Protein of unknown function.
 
     0.954
SDH88172.1
DUF1680 family protein.
 
     0.873
SDI00567.1
Protein of unknown function.
 
     0.754
SDH88347.1
Signal transduction histidine kinase.
 
   
 0.719
SDF63819.1
Glycosyl hydrolase family 76.
  
     0.702
SDI02391.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.686
SDH88204.1
Glycosyl hydrolases family 2, TIM barrel domain; Belongs to the glycosyl hydrolase 2 family.
 
     0.671
SDH03154.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.646
SDG91670.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.645
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.