STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH88733.140-residue YVTN family beta-propeller repeat-containing protein. (810 aa)    
Predicted Functional Partners:
SDH88699.1
Hypothetical protein.
       0.554
SDG02005.1
Iron complex outermembrane recepter protein.
  
    0.541
SDH01813.1
Quinoprotein glucose dehydrogenase.
 
 
 0.518
SDH87941.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
 
     0.451
SDH30573.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
 
 0.438
SDH77759.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.429
SDG43726.1
Protein of unknown function.
 
     0.405
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.