STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH92811.1Type VI secretion system, VipA, VC_A0107 or Hcp2. (146 aa)    
Predicted Functional Partners:
SDH92603.1
Uncharacterized conserved protein, implicated in type VI secretion and phage assembly.
 
  
 0.967
SDH93411.1
Hypothetical protein.
 
  
 0.961
SDH92782.1
Hypothetical protein.
 
     0.945
SDH93022.1
Hypothetical protein.
 
  
 0.930
SDH93481.1
Type VI secretion, VasB, ImpH, VC_A0111.
 
  
 0.903
SDH92892.1
PKD domain-containing protein.
 
     0.890
SDH92838.1
ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family.
 
  
 0.877
SDH92981.1
Gene 25-like lysozyme.
 
   
 0.869
SDH92723.1
Hypothetical protein.
 
     0.842
SDH92690.1
Hypothetical protein.
 
     0.831
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.