STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH93411.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
SDH93022.1
Hypothetical protein.
 
 
 0.981
SDH92811.1
Type VI secretion system, VipA, VC_A0107 or Hcp2.
 
  
 0.961
SDH93442.1
Hypothetical protein.
 
     0.954
SDH93481.1
Type VI secretion, VasB, ImpH, VC_A0111.
 
  
 0.944
SDH92603.1
Uncharacterized conserved protein, implicated in type VI secretion and phage assembly.
 
  
 0.849
SDH92981.1
Gene 25-like lysozyme.
 
   
 0.800
SDH92782.1
Hypothetical protein.
 
     0.794
SDH92690.1
Hypothetical protein.
 
     0.787
SDH92723.1
Hypothetical protein.
 
     0.787
SDH92892.1
PKD domain-containing protein.
 
     0.774
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.