STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kduI4-deoxy-L-threo-5-hexulose uronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (276 aa)    
Predicted Functional Partners:
SDI73994.1
Oligogalacturonide lyase.
     
 0.901
SDH92376.1
Tagaturonate reductase.
 
   
 0.809
uxaC
D-glucuronate isomerase.
 
  
 0.785
SDH55084.1
Unsaturated rhamnogalacturonyl hydrolase.
 
   
 0.774
SDH93552.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  
 0.773
SDH92408.1
Unsaturated rhamnogalacturonyl hydrolase.
 
   
 0.740
uxuA-2
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.699
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.683
SDH92346.1
Altronate hydrolase.
 
  
 0.664
SDG75112.1
Altronate hydrolase.
 
  
 0.655
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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