STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH94078.1Hexosaminidase. (765 aa)    
Predicted Functional Partners:
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.506
SDH94012.1
Phospholipase/carboxylesterase.
       0.506
SDH94045.1
Glyoxalase family protein.
       0.506
SDH93740.1
Alpha-1,2-mannosidase, putative.
 
     0.503
SDF79308.1
Alpha-1,2-mannosidase, putative.
 
     0.471
SDH06895.1
Predicted dehydrogenase.
  
     0.443
SDH94110.1
Serine/threonine protein kinase.
       0.423
SDH89104.1
Alpha-1,2-mannosidase, putative.
 
     0.410
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.