STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI01351.1RNA polymerase sigma-70 factor, ECF subfamily. (175 aa)    
Predicted Functional Partners:
SDI01386.1
Anti-sigma-K factor rskA.
 
 
 
 0.935
SDH54830.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.756
SDI09974.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.754
SDH00395.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.753
SDH40368.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.750
SDH71703.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.747
SDG20596.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.742
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.731
SDF89640.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.716
SDG91591.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.715
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.