STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI19746.1Gliding motility-associated C-terminal domain-containing protein. (662 aa)    
Predicted Functional Partners:
SDI60394.1
Type IX secretion system membrane protein, PorP/SprF family.
  
    0.755
SDH96120.1
Outer membrane protein beta-barrel domain-containing protein.
  
   
 0.743
SDH95765.1
Hypothetical protein.
  
    0.740
SDI47229.1
Protein of unknown function.
  
     0.737
SprA
Cell surface protein SprA.
  
   
 0.736
SDF90203.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.735
GldD
Gliding motility-associated lipoprotein GldD.
  
     0.735
SDG34813.1
Outer membrane protein OmpA.
 
   0.732
SDI18318.1
Protein of unknown function.
  
     0.732
SDI64718.1
Gliding motility-associated lipoprotein GldJ.
  
   
 0.724
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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