STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI45273.1MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily. (513 aa)    
Predicted Functional Partners:
SDI04154.1
Membrane fusion protein, multidrug efflux system.
 
   0.818
SDG35980.1
Membrane fusion protein, multidrug efflux system.
 
   0.806
SDI77519.1
Membrane fusion protein, multidrug efflux system.
 
   0.805
SDH75226.1
Membrane fusion protein, multidrug efflux system.
 
   0.804
SDI45235.1
DNA-binding transcriptional regulator, AcrR family.
       0.689
SDI45312.1
Uncharacterized oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.556
SDI45189.1
Response regulator; Two-component system, cell cycle response regulator/two-component system, OmpR family, phosphate regulon response regulator PhoB/two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
       0.461
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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