STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI67527.12-polyprenyl-6-methoxyphenol hydroxylase. (385 aa)    
Predicted Functional Partners:
SDI67488.1
AraC-type DNA-binding protein.
 
     0.938
SDI67450.1
HAMP domain-containing protein.
       0.504
SDG02480.1
Isopentenyl-diphosphate delta-isomerase.
   
  
 0.486
SDH13632.1
Hypothetical protein.
 
  
 0.457
SDI29050.1
Fatty acid hydroxylase superfamily protein.
  
 
 0.453
SDG17625.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.447
SDH35620.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
  
 
 0.446
SDI67564.1
Hypothetical protein.
       0.411
SDH74779.1
NmrA-like family protein.
  
  
 0.406
FabD
[Acyl-carrier-protein] S-malonyltransferase.
  
  
 0.400
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.