STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI73366.1PAS domain S-box-containing protein. (770 aa)    
Predicted Functional Partners:
SDF80089.1
Signal transduction histidine kinase.
 
 0.983
SDG59351.1
Hypothetical protein.
 
 
 0.983
SDH65587.1
Signal transduction histidine kinase.
 
 
 0.976
SDG84460.1
PAS domain S-box-containing protein.
 
 
0.975
SDI34358.1
PAS domain S-box-containing protein.
 
 
 
0.974
SDH65710.1
PAS domain S-box-containing protein.
 
 0.972
SDI73331.1
PAS domain S-box-containing protein.
  
 
 0.968
SDI02024.1
Signal transduction histidine kinase.
 
 0.964
SDI50429.1
Signal transduction histidine kinase.
 
 0.964
SDI57604.1
Response regulator; Putative two-component system response regulator/two-component system, cell cycle response regulator DivK/two-component system, NtrC family, nitrogen regulation response regulator NtrX.
 
 
 
 0.964
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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