STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI83608.1Alpha-amylase. (495 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.937
SDG66700.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.928
GlgP
Starch phosphorylase.
  
 0.925
SDI14052.1
Oligo-1,6-glucosidase.
 
  
  0.913
SDG05152.1
Maltose phosphorylase.
  
 
 0.911
SDG05272.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.905
SDH84557.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.905
SDH39119.1
Alpha-glucosidase.
  
 
 0.902
SDH76859.1
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
  
 
 0.902
SDH88485.1
Alpha-glucosidase.
  
 
 0.902
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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