STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFX06976.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (575 aa)    
Predicted Functional Partners:
KFX06977.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.951
KFX06978.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.906
KFX06974.1
Serine 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.894
KFX06975.1
Proteinase inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.857
KFX05776.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.699
pstB-2
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.697
KFX03320.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.610
KFX02651.1
Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.486
KFX06979.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
KFX06980.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
Your Current Organism:
Pectobacterium betavasculorum
NCBI taxonomy Id: 55207
Other names: ATCC 43762, CFBP 2122, CIP 105193, DSM 18076, Erwinia carotovora subsp. betavasculorum, ICMP 4226, LMG 2464, LMG 2466, LMG:2464, LMG:2466, NCPPB 2795, P. betavasculorum, Pectobacterium carotovorum subsp. betavasculorum, UCPB 193
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