STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFX07665.11,3-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)    
Predicted Functional Partners:
KFX07561.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.802
bcsA
Cellulose synthase; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.
   
 0.783
KFX06968.1
beta-D-glucoside glucohydrolase; Catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.776
KFX05778.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.749
KFX05923.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.712
KFW98170.1
Hemagglutinin; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.707
KFX06852.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.704
KFX07492.1
Expansin-YoaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.700
KFX05973.1
Exotoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.696
KFX07146.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.693
Your Current Organism:
Pectobacterium betavasculorum
NCBI taxonomy Id: 55207
Other names: ATCC 43762, CFBP 2122, CIP 105193, DSM 18076, Erwinia carotovora subsp. betavasculorum, ICMP 4226, LMG 2464, LMG 2466, LMG:2464, LMG:2466, NCPPB 2795, P. betavasculorum, Pectobacterium carotovorum subsp. betavasculorum, UCPB 193
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