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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFX07987.1Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)    
Predicted Functional Partners:
KFX07988.1
N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
KFX04037.1
Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
KFX07984.1
Deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.926
KFX04036.1
Deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.910
KFX07986.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
 
     0.878
KFX07093.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.686
atpF
ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.421
Your Current Organism:
Pectobacterium betavasculorum
NCBI taxonomy Id: 55207
Other names: ATCC 43762, CFBP 2122, CIP 105193, DSM 18076, Erwinia carotovora subsp. betavasculorum, ICMP 4226, LMG 2464, LMG 2466, LMG:2464, LMG:2466, NCPPB 2795, P. betavasculorum, Pectobacterium carotovorum subsp. betavasculorum, UCPB 193
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