STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFX05901.1Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (832 aa)    
Predicted Functional Partners:
KFX05902.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.981
KFX05904.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.971
KFX05900.1
Fimbriae major subunit protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.965
KFX00499.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.948
KFX00497.1
Fimbria A protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.937
KFX04730.1
Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.820
KFX05903.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.780
KFX07657.1
ShlB/FhaC/HecB family hemolysin secretion/activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.705
KFX00500.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.686
lpxT
Membrane protein; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.
  
    0.659
Your Current Organism:
Pectobacterium betavasculorum
NCBI taxonomy Id: 55207
Other names: ATCC 43762, CFBP 2122, CIP 105193, DSM 18076, Erwinia carotovora subsp. betavasculorum, ICMP 4226, LMG 2464, LMG 2466, LMG:2464, LMG:2466, NCPPB 2795, P. betavasculorum, Pectobacterium carotovorum subsp. betavasculorum, UCPB 193
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.