STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFX04700.1exo-poly-alpha-D-galacturonosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 28 family. (659 aa)    
Predicted Functional Partners:
KFX02638.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.855
KFX02637.1
Pectin acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.789
uxaC
Glucuronate isomerase; Catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.772
kduI
5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
     0.726
KFX03812.1
acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.725
KFX04699.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.723
KFX01490.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.710
KFX05330.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.647
KFX04436.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.619
KFX04701.1
General secretion pathway protein GspC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.613
Your Current Organism:
Pectobacterium betavasculorum
NCBI taxonomy Id: 55207
Other names: ATCC 43762, CFBP 2122, CIP 105193, DSM 18076, Erwinia carotovora subsp. betavasculorum, ICMP 4226, LMG 2464, LMG 2466, LMG:2464, LMG:2466, NCPPB 2795, P. betavasculorum, Pectobacterium carotovorum subsp. betavasculorum, UCPB 193
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