STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA50_00470Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (686 aa)    
Predicted Functional Partners:
HA50_00465
Cyclic-guanylate-specific phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.665
HA50_29825
RNA signal recognition particle; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.577
HA50_21360
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
HA50_05935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
HA50_14520
Stationary phase inducible protein CsiE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
HA50_07610
Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
  
     0.527
panZ
GNAT family N-acetyltransferase; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
  
     0.509
HA50_07800
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.451
HA50_11105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
wecH
Acetyltransferase; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.
  
    0.429
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
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