Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
HA50_04085Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)    
Predicted Functional Partners:
HA50_04095
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.982
HA50_04080
DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.908
HA50_04125
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.871
HA50_03145
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.836
HA50_00295
Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.831
HA50_21675
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.820
aspS
aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
  
 0.798
HA50_02350
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.787
HA50_04090
DUF4089 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.784
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.752
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
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