STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA50_07570Glutaredoxin, GrxB family; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)    
Predicted Functional Partners:
HA50_00970
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
mdtH
MFS transporter; Confers resistance to norfloxacin and enoxacin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.539
HA50_07565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.537
HA50_00975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
HA50_06520
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.506
HA50_10480
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
HA50_14315
Tellurite resistance methyltransferase TehB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.462
HA50_08810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.424
HA50_08460
Transcriptional regulator; Osmotically-inducible lipoprotein E; activator of ntr-like gene protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.420
HA50_07585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0502 family.
       0.401
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.