STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HA50_08090Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)    
Predicted Functional Partners:
HA50_16100
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
HA50_01070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
HA50_08495
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
HA50_14030
RpoE-regulated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
HA50_10930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0181 family.
  
     0.772
HA50_20645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
secM
SecA regulator SecM; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.771
HA50_07565
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
HA50_10260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
matP
Ter macrodomain-binding protein MatP; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.766
Your Current Organism:
Pantoea cypripedii
NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii
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