Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HA50_09580 | HA50_10450 | HA50_09580 | HA50_10450 | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
| HA50_09580 | HA50_19530 | HA50_09580 | HA50_19530 | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.633 |
| HA50_09580 | araA | HA50_09580 | HA50_08955 | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.614 |
| HA50_09580 | rhaA | HA50_09580 | HA50_10075 | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | L-rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.853 |
| HA50_09580 | rhaB | HA50_09580 | HA50_10080 | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.950 |
| HA50_09580 | rhaD | HA50_09580 | HA50_10070 | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | 0.641 |
| HA50_09580 | rhaM | HA50_09580 | HA50_10065 | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.766 |
| HA50_09580 | xylA | HA50_09580 | HA50_00105 | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family. | 0.704 |
| HA50_10450 | HA50_09580 | HA50_10450 | HA50_09580 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | 0.587 |
| HA50_10450 | araA | HA50_10450 | HA50_08955 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.992 |
| HA50_10450 | rhaB | HA50_10450 | HA50_10080 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.716 |
| HA50_10450 | rhaD | HA50_10450 | HA50_10070 | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | 0.571 |
| HA50_19530 | HA50_09580 | HA50_19530 | HA50_09580 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | 0.633 |
| HA50_19530 | rhaB | HA50_19530 | HA50_10080 | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.679 |
| araA | HA50_09580 | HA50_08955 | HA50_09580 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | 0.614 |
| araA | HA50_10450 | HA50_08955 | HA50_10450 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.992 |
| araA | rhaB | HA50_08955 | HA50_10080 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.665 |
| araA | rhaD | HA50_08955 | HA50_10070 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily. | 0.616 |
| araA | xylA | HA50_08955 | HA50_00105 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family. | 0.514 |
| rhaA | HA50_09580 | HA50_10075 | HA50_09580 | L-rhamnose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carbohydrate kinase; Catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. | 0.853 |
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