HA50_10375 protein (Pantoea cypripedii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HA50_10375

Antimicrobial peptide ABC transporter permease SapC; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)

Predicted Functional Partners:

HA50_10370

0.999

HA50_10380

0.998

HA50_10365

0.997

HA50_10385

0.996

HA50_00340

0.874

HA50_00345

0.832

HA50_14835

0.828

HA50_27870

0.826

HA50_28035

0.821

HA50_20905

0.820

Your Current Organism:

Pantoea cypripedii

NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

page 1 of 5

Server load: low (36%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About

node1	node2	node1 annotation	node2 annotation	score
HA50_00340	HA50_00345	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
HA50_00340	HA50_10365	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
HA50_00340	HA50_10370	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antimicrobial peptide ABC transporter permease SapB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
HA50_00340	HA50_10375	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antimicrobial peptide ABC transporter permease SapC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
HA50_00340	HA50_10380	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.679
HA50_00340	HA50_10385	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
HA50_00340	HA50_14835	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
HA50_00340	HA50_20905	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440
HA50_00340	HA50_27870	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
HA50_00340	HA50_28035	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
HA50_00345	HA50_00340	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
HA50_00345	HA50_10365	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
HA50_00345	HA50_10375	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antimicrobial peptide ABC transporter permease SapC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
HA50_00345	HA50_10380	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.620
HA50_00345	HA50_10385	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
HA50_10365	HA50_00340	Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
HA50_10365	HA50_00345	Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
HA50_10365	HA50_10370	Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antimicrobial peptide ABC transporter permease SapB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
HA50_10365	HA50_10375	Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Antimicrobial peptide ABC transporter permease SapC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
HA50_10365	HA50_10380	Peptide ABC transporter substrate-binding protein SapA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.995