HA50_17670 protein (Pantoea cypripedii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

HA50_17670

Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)

Predicted Functional Partners:

HA50_17675

0.988

HA50_17595

0.987

HA50_27405

0.987

HA50_15135

0.984

HA50_17570

0.984

HA50_17610

0.976

HA50_17660

0.974

HA50_17615

0.972

HA50_17590

0.968

HA50_15130

0.960

Your Current Organism:

Pantoea cypripedii

NCBI taxonomy Id: 55209
Other names: ATCC 29267, Bacillus cypripedii, CFBP 3613, CIP 105195, DSM 3873, Erwinia carotovora var. cypripedii, Erwinia cypripedii, Erwinia cyrpipedii, LMG 2655, LMG 2657, LMG:2655, LMG:2657, NCPPB 3004, P. cypripedii, Pectobacterium cypripedii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

page 1 of 6

Server load: low (38%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2025

Credits

Access

Info

About

node1	node2	node1 annotation	node2 annotation	score
HA50_15130	HA50_15135	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
HA50_15130	HA50_17570	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
HA50_15130	HA50_17590	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
HA50_15130	HA50_17595	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
HA50_15130	HA50_17610	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
HA50_15130	HA50_17615	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
HA50_15130	HA50_17660	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
HA50_15130	HA50_17670	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
HA50_15130	HA50_17675	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
HA50_15130	HA50_27405	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
HA50_15135	HA50_15130	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
HA50_15135	HA50_17590	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
HA50_15135	HA50_17595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
HA50_15135	HA50_17610	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
HA50_15135	HA50_17615	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951
HA50_15135	HA50_17660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
HA50_15135	HA50_17670	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
HA50_15135	HA50_17675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
HA50_15135	HA50_27405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
HA50_17570	HA50_15130	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927